Lexia is a well respected app used in many schools that is also available as a home version. The home version is called Lexia reading core 5 beginning program, and costs $175 for a one year subscription. 

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Homer: is a fun adaptive phonics program for younger students, best for pre-k through1st or 2nd. The subscription is $42 a year.

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Lalilo: is an engaging phonics and comprehension program for K-2 that is currently completely free.

 

Explode the Code: is a great program for reinforcing phonics and spelling patterns. It is offered in both book forat and online. I recommend the online version for access to all the materials. The online pricing is $65/ year. 

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Dreambox: Is an adaptive online math program for PreK - 8th grade that kids love. The cost is $12 a month.